Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944696.1_cds_XP_016487433.1_78168
CDS Infomation

[gene=LOC107807537] [db_xref=GeneID:107807537] [protein=probable serine/threonine-protein kinase At1g01540] [protein_id=XP_016487433.1] [location=complement(join(122842..123009,123487..123696,123797..123926,124018..124188,124288..124410,124564..124668,125173..125813))] [gbkey=CDS]
Sequence

ATGTCTGGGTTTCTGAGCGATGAACTCTCAAAAAGAACCTCAATTTTTGGTCTACGTTTA
TGGGTCGTTTTGGGTATTTGCGTTGGAGCTGCAATTGTGTTAGTTCTCTTCCTTATCTCT
CTCTGGTTCACTACAAAACGTAACAATAAAAAAACAACTCTTTCAGTTTCAGCTAAGAAA
AACAAAAACAACAACCCCAATATTCCTAAGGTATCCAAAGAAATTCAAGAAATCCGAATT
GACCCATCACGGACTCTACCCGAAAACCCGAAATTACTCCCACCTCCGGTTCCGGACCCA
TTACCCGAACCCGAGGAAGACACCCAGAATTCAAGTGGTCATCAGAGAATCCATATTGAA
GTCGGAAAGGGTCATAAGATTGCCTATCCGGATCGGGTCGGGTTAGGTGGCGGGTCAAGT
CATGGTAGTGGAGAAGTATGTTCTGTTGAGCAGGCTATTATTGCTGTGCCTGAGGTTTCA
CATTTGGGGTGGGGCCATTGGTATACACTGAGAGAGCTTGAGATTGCAACTAATTTCTTT
GCTGATGAAAATGTGATTGGTGAAGGTGGTTATGGAATTGTTTACCGTGGAGTTATGGAA
GATAGCAGTAATGTTGCTGTTAAGAATTTGCTCAATAACAGGGGACAAGCAGAGAGGGAG
TTTAAGGTTGAGGTTGAAGCAATTGGTCGAGTTCGGCATAAGAATTTGGTGAGGTTACTC
GGTTACTGTGCTGAGGGAGCTCACAGGATTCTTGTGTATGAGTATGTGGACAACGGGAAC
TTAGAACAGTGGATCCATGGAGATGTAGGGCCGTGCAGTCCTCTTACATGGGAAATTAGA
ATGAATATCATTCTTGGAACAGCTAAAGGGTTAACCTATCTGCATGAGGGCCTCGAACCC
AAGGTTGTTCACCGTGACATTAAATCAAGCAATATTTTGCTCGATAAGCAATGGAATCCA
AAGGTGTCAGACTTTGGCTTGGCAAAGCTTTTGGGCGCTGAAAAGAGCTACATTACTACT
CGGGTTATGGGAACATTTGGTTACGTTGCTCCGGAATATGCTAGCACTGGCATGTTGAAT
GAGAGAAGTGATGTGTATAGTTTTGGAATTCTTATTATGGAGATCATTAGTGGAAGGAAT
CCGGTGGATTACAGCCGTCCTCCTGGAGAGGTAACTCTGGTTGATTGGCTTAAAATAATG
GTTTCAAACCGGAATGCGGAGGGTGTTTTGGATCCCAAGTTGGCGGAGAAGCCTTCTTCA
AGAGCACTGAAACGTGTCCTTTTGGTAGCATTACGCTGTGTCGACCCCAATGCTCAGAAG
AGGCCAAAAATGGGACATGTGATACACATGCTTGAAGCTGATGATTTTCCCTTCCGTGAT
GAGCGACGAGCTTCGAGGGAACATGGTCGCTTATATCGTGATGGCGTGAAAGAGAGGGTA
ATGGACAAGCGTATAATTGAATCAGGTGATAGCAGTGGATACGAAAGTAGTGTGCACACC
AACCGGTCTTTCTTGAGGAAGCAAGAAACTGATGATGAGCACCAGTAG

Peptide Sequence

PEP ID

XP_016487433.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g01540 [Nicotiana tabacum]
Sequence

MSGFLSDELSKRTSIFGLRLWVVLGICVGAAIVLVLFLISLWFTTKRNNKKTTLSVSAKK
NKNNNPNIPKVSKEIQEIRIDPSRTLPENPKLLPPPVPDPLPEPEEDTQNSSGHQRIHIE
VGKGHKIAYPDRVGLGGGSSHGSGEVCSVEQAIIAVPEVSHLGWGHWYTLRELEIATNFF
ADENVIGEGGYGIVYRGVMEDSSNVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLL
GYCAEGAHRILVYEYVDNGNLEQWIHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEP
KVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGAEKSYITTRVMGTFGYVAPEYASTGMLN
ERSDVYSFGILIMEIISGRNPVDYSRPPGEVTLVDWLKIMVSNRNAEGVLDPKLAEKPSS
RALKRVLLVALRCVDPNAQKRPKMGHVIHMLEADDFPFRDERRASREHGRLYRDGVKERV
MDKRIIESGDSSGYESSVHTNRSFLRKQETDDEHQ

Transcript Sequence

Gene sequence data has not been registered.